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 EMBL, Meyerhofstrasse 1,
 69117 Heidelberg,
 Germany
 Room:: V116
 Tel:: +49 6221 387- 8140

 Author - Developer
 Georgios A. Pavlopoulos
 pavlopou@embl.de

 Scientific supervisor
 Reinhard Schneider
 rschneid@embl.de

Java3D 1.5.1 API and Java JRE or JDK 1.5 should be pre-installed for Arena3D to Run as a stand alone application
Mouse with 3 buttons is also required for easier navigation.
Left button is used rotation , Middle button for zooming, Right button  for shifting
 

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Arena3D basic idea is to use multilayered graphs to visualize biological networks. In such a way heterogeneous data will be distinct between each other
Product Summary

· Multilayered graphs

· Different layout algorithms

· Compatibility with other tools

· Clustering—Kmeans , Affinity Propagation, MCL

· Clustering—HCL, NJ, UPGMA

· Easy navigation and searching

· Clustering Between layers

· Indirect Connections

· Pre-defined Clustering

· Save and reload network

It is licensed, currently not an open source product and free for academics

EMBL all rights reserved